Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZN94849.1 | KZN95948.1 | AZI98_17345 | AZI98_11205 | Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.938 |
KZN95563.1 | KZN95948.1 | AZI98_14080 | AZI98_11205 | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.514 |
KZN95948.1 | KZN94849.1 | AZI98_11205 | AZI98_17345 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
KZN95948.1 | KZN95563.1 | AZI98_11205 | AZI98_14080 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.514 |
KZN95948.1 | KZN95949.1 | AZI98_11205 | AZI98_11210 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.763 |
KZN95948.1 | KZN95965.1 | AZI98_11205 | AZI98_11200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
KZN95948.1 | KZN96974.1 | AZI98_11205 | AZI98_05245 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Zinc-dependent alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
KZN95949.1 | KZN95948.1 | AZI98_11210 | AZI98_11205 | Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.763 |
KZN95965.1 | KZN95948.1 | AZI98_11200 | AZI98_11205 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.412 |
KZN96974.1 | KZN95948.1 | AZI98_05245 | AZI98_11205 | Zinc-dependent alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.520 |