STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZN95455.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (355 aa)    
Predicted Functional Partners:
KZN94600.1
Macrolide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.893
KZN94722.1
Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.881
KZN95454.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.852
AZI98_13495
Transposase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.839
KZN97770.1
Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
    0.684
KZN96426.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.587
KZN96615.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
  0.583
KZN97480.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.580
KZN96098.1
Macrolide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.580
KZN95359.1
Bacitracin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.580
Your Current Organism:
Aeribacillus pallidus
NCBI taxonomy Id: 33936
Other names: A. pallidus, ATCC 51176, Bacillus pallidus, DSM 3670, Geobacillus pallidus, Geobacillus sp. 8, Geobacillus sp. 8m3, LMG 19006, LMG:19006, strain H12
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