Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZN94677.1 | KZN95149.1 | AZI98_18420 | AZI98_16130 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.432 |
KZN94677.1 | KZN96183.1 | AZI98_18420 | AZI98_08970 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.493 |
KZN94677.1 | KZN97291.1 | AZI98_18420 | AZI98_04470 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.666 |
KZN95149.1 | KZN94677.1 | AZI98_16130 | AZI98_18420 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
KZN95149.1 | KZN96183.1 | AZI98_16130 | AZI98_08970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.404 |
KZN95149.1 | KZN97291.1 | AZI98_16130 | AZI98_04470 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
KZN95149.1 | ipk | AZI98_16130 | AZI98_07105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.407 |
KZN96183.1 | KZN94677.1 | AZI98_08970 | AZI98_18420 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
KZN96183.1 | KZN95149.1 | AZI98_08970 | AZI98_16130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.404 |
KZN97291.1 | KZN94677.1 | AZI98_04470 | AZI98_18420 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.666 |
KZN97291.1 | KZN95149.1 | AZI98_04470 | AZI98_16130 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.475 |
ipk | KZN95149.1 | AZI98_07105 | AZI98_16130 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.407 |