Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARP42854.1 | nosY | GTHT12_01314 | GTHT12_01312 | Hypothetical protein. | Copper ABC transporter permease. | 0.971 |
ARP42854.1 | ybhF | GTHT12_01314 | GTHT12_00403 | Hypothetical protein. | Putative ABC transporter ATP-binding protein YbhF. | 0.516 |
ARP42854.1 | ydbK | GTHT12_01314 | GTHT12_01076 | Hypothetical protein. | Putative membrane protein YdbK. | 0.868 |
ARP44492.1 | ybhF | GTHT12_02998 | GTHT12_00403 | ABC-type transport system involved in multi-copper enzyme maturationpermease component. | Putative ABC transporter ATP-binding protein YbhF. | 0.643 |
ARP44492.1 | ybhR_1 | GTHT12_02998 | GTHT12_00404 | ABC-type transport system involved in multi-copper enzyme maturationpermease component. | Inner membrane transport permease YbhR. | 0.705 |
ARP44492.1 | ybhR_2 | GTHT12_02998 | GTHT12_03002 | ABC-type transport system involved in multi-copper enzyme maturationpermease component. | Inner membrane transport permease YbhR. | 0.867 |
atpD | ybhF | GTHT12_02883 | GTHT12_00403 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Putative ABC transporter ATP-binding protein YbhF. | 0.518 |
drrB | ybhF | GTHT12_00339 | GTHT12_00403 | Doxorubicin resistance ABC transporter permease protein DrrB. | Putative ABC transporter ATP-binding protein YbhF. | 0.614 |
drrB | ybhR_1 | GTHT12_00339 | GTHT12_00404 | Doxorubicin resistance ABC transporter permease protein DrrB. | Inner membrane transport permease YbhR. | 0.600 |
drrB | ybhR_2 | GTHT12_00339 | GTHT12_03002 | Doxorubicin resistance ABC transporter permease protein DrrB. | Inner membrane transport permease YbhR. | 0.448 |
livF_3 | ybhF | GTHT12_02536 | GTHT12_00403 | High-affinity branched-chain amino acid transport ATP-binding protein LivF. | Putative ABC transporter ATP-binding protein YbhF. | 0.690 |
nosY | ARP42854.1 | GTHT12_01312 | GTHT12_01314 | Copper ABC transporter permease. | Hypothetical protein. | 0.971 |
nosY | ybhF | GTHT12_01312 | GTHT12_00403 | Copper ABC transporter permease. | Putative ABC transporter ATP-binding protein YbhF. | 0.643 |
ybhF | ARP42854.1 | GTHT12_00403 | GTHT12_01314 | Putative ABC transporter ATP-binding protein YbhF. | Hypothetical protein. | 0.516 |
ybhF | ARP44492.1 | GTHT12_00403 | GTHT12_02998 | Putative ABC transporter ATP-binding protein YbhF. | ABC-type transport system involved in multi-copper enzyme maturationpermease component. | 0.643 |
ybhF | atpD | GTHT12_00403 | GTHT12_02883 | Putative ABC transporter ATP-binding protein YbhF. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.518 |
ybhF | drrB | GTHT12_00403 | GTHT12_00339 | Putative ABC transporter ATP-binding protein YbhF. | Doxorubicin resistance ABC transporter permease protein DrrB. | 0.614 |
ybhF | livF_3 | GTHT12_00403 | GTHT12_02536 | Putative ABC transporter ATP-binding protein YbhF. | High-affinity branched-chain amino acid transport ATP-binding protein LivF. | 0.690 |
ybhF | nosY | GTHT12_00403 | GTHT12_01312 | Putative ABC transporter ATP-binding protein YbhF. | Copper ABC transporter permease. | 0.643 |
ybhF | ybhR_1 | GTHT12_00403 | GTHT12_00404 | Putative ABC transporter ATP-binding protein YbhF. | Inner membrane transport permease YbhR. | 0.967 |
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