Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARP43018.1 | ARP43689.1 | GTHT12_01481 | GTHT12_02167 | Hypothetical protein. | Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.618 |
ARP43018.1 | cbiM | GTHT12_01481 | GTHT12_01276 | Hypothetical protein. | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | 0.697 |
ARP43018.1 | guaA_1 | GTHT12_01481 | GTHT12_01176 | Hypothetical protein. | Putative GMP synthase. | 0.518 |
ARP43018.1 | larC | GTHT12_01481 | GTHT12_01479 | Hypothetical protein. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.997 |
ARP43018.1 | mnmA2 | GTHT12_01481 | GTHT12_02066 | Hypothetical protein. | tRNA-specific 2-thiouridylase MnmA 2; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.736 |
ARP43018.1 | ntcA_1 | GTHT12_01481 | GTHT12_00205 | Hypothetical protein. | Global nitrogen regulator. | 0.601 |
ARP43018.1 | ntcA_2 | GTHT12_01481 | GTHT12_00216 | Hypothetical protein. | Global nitrogen regulator. | 0.601 |
ARP43018.1 | nth | GTHT12_01481 | GTHT12_01682 | Hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.720 |
ARP43018.1 | purE_1 | GTHT12_01481 | GTHT12_01480 | Hypothetical protein. | N5-carboxyaminoimidazole ribonucleotide mutase. | 0.995 |
ARP43018.1 | xseB | GTHT12_01481 | GTHT12_01888 | Hypothetical protein. | Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.507 |
ARP43689.1 | ARP43018.1 | GTHT12_02167 | GTHT12_01481 | Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Hypothetical protein. | 0.618 |
cbiM | ARP43018.1 | GTHT12_01276 | GTHT12_01481 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | Hypothetical protein. | 0.697 |
cbiM | larC | GTHT12_01276 | GTHT12_01479 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.601 |
cbiM | ntcA_1 | GTHT12_01276 | GTHT12_00205 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | Global nitrogen regulator. | 0.662 |
cbiM | ntcA_2 | GTHT12_01276 | GTHT12_00216 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | Global nitrogen regulator. | 0.662 |
cbiM | purE_1 | GTHT12_01276 | GTHT12_01480 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | N5-carboxyaminoimidazole ribonucleotide mutase. | 0.713 |
guaA_1 | ARP43018.1 | GTHT12_01176 | GTHT12_01481 | Putative GMP synthase. | Hypothetical protein. | 0.518 |
larC | ARP43018.1 | GTHT12_01479 | GTHT12_01481 | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | Hypothetical protein. | 0.997 |
larC | cbiM | GTHT12_01479 | GTHT12_01276 | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | 0.601 |
larC | ntcA_1 | GTHT12_01479 | GTHT12_00205 | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | Global nitrogen regulator. | 0.600 |
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