Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARP41414.1 | sigB | GTHT12_03489 | GTHT12_02953 | Hypothetical protein. | RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family. | 0.580 |
| ARP41414.1 | sigF | GTHT12_03489 | GTHT12_01819 | Hypothetical protein. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.790 |
| ARP41414.1 | spoIIAA | GTHT12_03489 | GTHT12_01821 | Hypothetical protein. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.816 |
| ARP43339.1 | SpoVAD | GTHT12_01815 | GTHT12_01814 | Stage V sporulation protein AE. | Stage V sporulation protein AD. | 0.970 |
| ARP43339.1 | sigF | GTHT12_01815 | GTHT12_01819 | Stage V sporulation protein AE. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.832 |
| ARP43339.1 | spoIIAA | GTHT12_01815 | GTHT12_01821 | Stage V sporulation protein AE. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.727 |
| ARP43339.1 | spoIIAB | GTHT12_01815 | GTHT12_01820 | Stage V sporulation protein AE. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.849 |
| ARP43339.1 | spoIIE | GTHT12_01815 | GTHT12_03111 | Stage V sporulation protein AE. | Stage II sporulation protein E. | 0.496 |
| ARP43339.1 | spoIVA | GTHT12_01815 | GTHT12_01728 | Stage V sporulation protein AE. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.798 |
| SpoVAD | ARP43339.1 | GTHT12_01814 | GTHT12_01815 | Stage V sporulation protein AD. | Stage V sporulation protein AE. | 0.970 |
| SpoVAD | sigF | GTHT12_01814 | GTHT12_01819 | Stage V sporulation protein AD. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.827 |
| SpoVAD | spoIIAA | GTHT12_01814 | GTHT12_01821 | Stage V sporulation protein AD. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.718 |
| SpoVAD | spoIIAB | GTHT12_01814 | GTHT12_01820 | Stage V sporulation protein AD. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.844 |
| SpoVAD | spoIIE | GTHT12_01814 | GTHT12_03111 | Stage V sporulation protein AD. | Stage II sporulation protein E. | 0.506 |
| SpoVAD | spoIVA | GTHT12_01814 | GTHT12_01728 | Stage V sporulation protein AD. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.783 |
| rsbW_1 | sigB | GTHT12_01055 | GTHT12_02953 | Serine-protein kinase RsbW. | RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family. | 0.580 |
| rsbW_1 | sigF | GTHT12_01055 | GTHT12_01819 | Serine-protein kinase RsbW. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.790 |
| rsbW_1 | spoIIAA | GTHT12_01055 | GTHT12_01821 | Serine-protein kinase RsbW. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.886 |
| rsbW_1 | spoIIAB | GTHT12_01055 | GTHT12_01820 | Serine-protein kinase RsbW. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.660 |
| rsbW_2 | sigB | GTHT12_02952 | GTHT12_02953 | Serine-protein kinase RsbW. | RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family. | 0.998 |
page 1 of 4