STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG22604.1Hypothetical protein. (739 aa)    
Predicted Functional Partners:
LepB
Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.572
OJG20430.1
Hypothetical protein.
 
   
0.545
OJG17377.1
Hypothetical protein.
 
   
0.539
OJG23692.1
Hypothetical protein.
  
  
 0.493
OJG13688.1
Serine protease do-like htrA.
 
   
 0.464
OJG17755.1
Hypothetical protein.
 
   
 0.456
OJG13892.1
Hypothetical protein.
  
     0.455
OJG21295.1
Hypothetical protein.
 
  
 0.436
OJG24209.1
Hypothetical protein.
  
     0.416
OJG22606.1
Hypothetical protein.
       0.401
Your Current Organism:
Enterococcus avium
NCBI taxonomy Id: 33945
Other names: ATCC 14025, CCUG 7983, CIP 103019, DSM 20679, E. avium, JCM 8722, LMG 10744, LMG:10744, NBRC 100477, NCDO 2369, NCIMB 702369, NCTC 9938, Streptococcus avium, strain Guthof E6844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.