STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG22115.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
OJG22114.1
Hypothetical protein.
    
0.974
OJG22117.1
Hypothetical protein.
 
     0.926
OJG22113.1
Hypothetical protein.
 
  
 0.924
OJG22109.1
Hypothetical protein.
 
  
 0.913
OJG22110.1
Hypothetical protein.
 
  
 0.902
cutD
Hypothetical protein; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).
 
   
 0.896
OJG22116.1
Hypothetical protein.
       0.896
cutC-2
Hypothetical protein; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
 
   
 0.844
OJG22104.1
Hypothetical protein.
 
 
 0.807
OJG22332.1
Hypothetical protein.
 
    0.797
Your Current Organism:
Enterococcus avium
NCBI taxonomy Id: 33945
Other names: ATCC 14025, CCUG 7983, CIP 103019, DSM 20679, E. avium, JCM 8722, LMG 10744, LMG:10744, NBRC 100477, NCDO 2369, NCIMB 702369, NCTC 9938, Streptococcus avium, strain Guthof E6844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.