Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG15074.1 | OJG21808.1 | RU95_GL003906 | RU95_GL001007 | Hypothetical protein. | CoA disulfide reductase. | 0.511 |
OJG15074.1 | PhnE | RU95_GL003906 | RU95_GL001255 | Hypothetical protein. | Phosphonate ABC transporter, permease PhnE. | 0.404 |
OJG15074.1 | PhnE-2 | RU95_GL003906 | RU95_GL001256 | Hypothetical protein. | Phosphonate ABC transporter, permease PhnE. | 0.404 |
OJG21808.1 | OJG15074.1 | RU95_GL001007 | RU95_GL003906 | CoA disulfide reductase. | Hypothetical protein. | 0.511 |
OJG21808.1 | PhnE | RU95_GL001007 | RU95_GL001255 | CoA disulfide reductase. | Phosphonate ABC transporter, permease PhnE. | 0.410 |
OJG21808.1 | PhnE-2 | RU95_GL001007 | RU95_GL001256 | CoA disulfide reductase. | Phosphonate ABC transporter, permease PhnE. | 0.410 |
OJG24168.1 | OJG24169.1 | RU95_GL001257 | RU95_GL001258 | Hypothetical protein. | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | 0.686 |
OJG24168.1 | PhnD | RU95_GL001257 | RU95_GL001253 | Hypothetical protein. | Hypothetical protein. | 0.499 |
OJG24168.1 | PhnE | RU95_GL001257 | RU95_GL001255 | Hypothetical protein. | Phosphonate ABC transporter, permease PhnE. | 0.821 |
OJG24168.1 | PhnE-2 | RU95_GL001257 | RU95_GL001256 | Hypothetical protein. | Phosphonate ABC transporter, permease PhnE. | 0.852 |
OJG24168.1 | phnC | RU95_GL001257 | RU95_GL001254 | Hypothetical protein. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.769 |
OJG24169.1 | OJG24168.1 | RU95_GL001258 | RU95_GL001257 | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | Hypothetical protein. | 0.686 |
OJG24169.1 | PhnD | RU95_GL001258 | RU95_GL001253 | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | Hypothetical protein. | 0.765 |
OJG24169.1 | PhnE | RU95_GL001258 | RU95_GL001255 | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | Phosphonate ABC transporter, permease PhnE. | 0.890 |
OJG24169.1 | PhnE-2 | RU95_GL001258 | RU95_GL001256 | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | Phosphonate ABC transporter, permease PhnE. | 0.915 |
OJG24169.1 | phnC | RU95_GL001258 | RU95_GL001254 | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.886 |
PhnD | OJG24168.1 | RU95_GL001253 | RU95_GL001257 | Hypothetical protein. | Hypothetical protein. | 0.499 |
PhnD | OJG24169.1 | RU95_GL001253 | RU95_GL001258 | Hypothetical protein. | 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. | 0.765 |
PhnD | PhnE | RU95_GL001253 | RU95_GL001255 | Hypothetical protein. | Phosphonate ABC transporter, permease PhnE. | 0.982 |
PhnD | PhnE-2 | RU95_GL001253 | RU95_GL001256 | Hypothetical protein. | Phosphonate ABC transporter, permease PhnE. | 0.981 |
page 1 of 2