STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG24176.1Sugar phosphate isomerase/epimerase YcjR. (266 aa)    
Predicted Functional Partners:
OJG24177.1
Oxidoreductase NAD-binding Rossmann fold protein.
 
  
 0.938
OJG24175.1
Oxidoreductase, zinc-binding dehydrogenase.
 
  
 0.931
OJG24172.1
Extracellular solute-binding protein.
 
  
 0.908
OJG24174.1
Inner membrane ABC transporter permease ycjP.
 
  
 0.785
OJG24173.1
Inner membrane ABC transporter permease ycjO.
 
  
 0.760
OJG24171.1
Hypothetical protein.
 
  
 0.691
OJG21241.1
Hypothetical protein.
 
  
 0.654
OJG21246.1
Hypothetical protein.
 
   
 0.654
OJG22092.1
Hypothetical protein.
 
   
 0.652
OJG22096.1
Hypothetical protein.
 
  
 0.643
Your Current Organism:
Enterococcus avium
NCBI taxonomy Id: 33945
Other names: ATCC 14025, CCUG 7983, CIP 103019, DSM 20679, E. avium, JCM 8722, LMG 10744, LMG:10744, NBRC 100477, NCDO 2369, NCIMB 702369, NCTC 9938, Streptococcus avium, strain Guthof E6844
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