Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG20840.1 | OJG20841.1 | RU95_GL001894 | RU95_GL001895 | Hypothetical protein. | Hypothetical protein. | 0.514 |
OJG20840.1 | OJG20842.1 | RU95_GL001894 | RU95_GL001896 | Hypothetical protein. | Hypothetical protein. | 0.442 |
OJG20840.1 | OJG20843.1 | RU95_GL001894 | RU95_GL001897 | Hypothetical protein. | Hypothetical protein. | 0.430 |
OJG20841.1 | OJG20840.1 | RU95_GL001895 | RU95_GL001894 | Hypothetical protein. | Hypothetical protein. | 0.514 |
OJG20841.1 | OJG20842.1 | RU95_GL001895 | RU95_GL001896 | Hypothetical protein. | Hypothetical protein. | 0.717 |
OJG20841.1 | OJG20843.1 | RU95_GL001895 | RU95_GL001897 | Hypothetical protein. | Hypothetical protein. | 0.677 |
OJG20842.1 | OJG20840.1 | RU95_GL001896 | RU95_GL001894 | Hypothetical protein. | Hypothetical protein. | 0.442 |
OJG20842.1 | OJG20841.1 | RU95_GL001896 | RU95_GL001895 | Hypothetical protein. | Hypothetical protein. | 0.717 |
OJG20842.1 | OJG20843.1 | RU95_GL001896 | RU95_GL001897 | Hypothetical protein. | Hypothetical protein. | 0.713 |
OJG20842.1 | OJG21047.1 | RU95_GL001896 | RU95_GL001677 | Hypothetical protein. | Hemolysin A. | 0.403 |
OJG20842.1 | OJG24074.1 | RU95_GL001896 | RU95_GL001163 | Hypothetical protein. | Hypothetical protein. | 0.538 |
OJG20842.1 | ftsH | RU95_GL001896 | RU95_GL002730 | Hypothetical protein. | ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.408 |
OJG20842.1 | mltG | RU95_GL001896 | RU95_GL004120 | Hypothetical protein. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.412 |
OJG20842.1 | rpoC | RU95_GL001896 | RU95_GL003151 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.480 |
OJG20843.1 | OJG20840.1 | RU95_GL001897 | RU95_GL001894 | Hypothetical protein. | Hypothetical protein. | 0.430 |
OJG20843.1 | OJG20841.1 | RU95_GL001897 | RU95_GL001895 | Hypothetical protein. | Hypothetical protein. | 0.677 |
OJG20843.1 | OJG20842.1 | RU95_GL001897 | RU95_GL001896 | Hypothetical protein. | Hypothetical protein. | 0.713 |
OJG20843.1 | OJG21047.1 | RU95_GL001897 | RU95_GL001677 | Hypothetical protein. | Hemolysin A. | 0.416 |
OJG20843.1 | ftsH | RU95_GL001897 | RU95_GL002730 | Hypothetical protein. | ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.407 |
OJG20843.1 | rpoC | RU95_GL001897 | RU95_GL003151 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.645 |
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