STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG23862.1Cysteine desulfurase. (374 aa)    
Predicted Functional Partners:
YedF
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
 
 
 0.962
OJG14622.1
NifU family SUF system FeS assembly protein.
 
 
 0.954
SelB
Selenocysteine-specific translation elongation factor.
 
   
 0.938
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
   
 0.914
SufD
FeS assembly protein SufD.
 
 
 0.884
OJG23864.1
Hypothetical protein.
     
 0.866
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.861
SufB
FeS assembly protein SufB.
 
 
 0.814
SufC
Vegetative protein.
 
  
 0.805
OJG23859.1
Hypothetical protein.
  
 
 0.797
Your Current Organism:
Enterococcus avium
NCBI taxonomy Id: 33945
Other names: ATCC 14025, CCUG 7983, CIP 103019, DSM 20679, E. avium, JCM 8722, LMG 10744, LMG:10744, NBRC 100477, NCDO 2369, NCIMB 702369, NCTC 9938, Streptococcus avium, strain Guthof E6844
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