Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG17917.1 | OJG17918.1 | RU95_GL002746 | RU95_GL002747 | Thiamine pyrophosphokinase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.910 |
OJG17917.1 | OJG17921.1 | RU95_GL002746 | RU95_GL002750 | Thiamine pyrophosphokinase. | Protein phosphatase 2C. | 0.578 |
OJG17917.1 | PknB | RU95_GL002746 | RU95_GL002749 | Thiamine pyrophosphokinase. | Hypothetical protein. | 0.788 |
OJG17917.1 | RsmB | RU95_GL002746 | RU95_GL002751 | Thiamine pyrophosphokinase. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.462 |
OJG17917.1 | TenA | RU95_GL002746 | RU95_GL001805 | Thiamine pyrophosphokinase. | Transcriptional regulator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.921 |
OJG17917.1 | adk | RU95_GL002746 | RU95_GL001758 | Thiamine pyrophosphokinase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.909 |
OJG17917.1 | priA | RU95_GL002746 | RU95_GL002754 | Thiamine pyrophosphokinase. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.786 |
OJG17917.1 | rsgA | RU95_GL002746 | RU95_GL002675 | Thiamine pyrophosphokinase. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.930 |
OJG17917.1 | rsgA-2 | RU95_GL002746 | RU95_GL002748 | Thiamine pyrophosphokinase. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.984 |
OJG17918.1 | OJG17917.1 | RU95_GL002747 | RU95_GL002746 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Thiamine pyrophosphokinase. | 0.910 |
OJG17918.1 | OJG17921.1 | RU95_GL002747 | RU95_GL002750 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Protein phosphatase 2C. | 0.770 |
OJG17918.1 | PknB | RU95_GL002747 | RU95_GL002749 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Hypothetical protein. | 0.789 |
OJG17918.1 | RsmB | RU95_GL002747 | RU95_GL002751 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.795 |
OJG17918.1 | priA | RU95_GL002747 | RU95_GL002754 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.731 |
OJG17918.1 | rsgA | RU95_GL002747 | RU95_GL002675 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.447 |
OJG17918.1 | rsgA-2 | RU95_GL002747 | RU95_GL002748 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.883 |
OJG17921.1 | OJG17917.1 | RU95_GL002750 | RU95_GL002746 | Protein phosphatase 2C. | Thiamine pyrophosphokinase. | 0.578 |
OJG17921.1 | OJG17918.1 | RU95_GL002750 | RU95_GL002747 | Protein phosphatase 2C. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.770 |
OJG17921.1 | PknB | RU95_GL002750 | RU95_GL002749 | Protein phosphatase 2C. | Hypothetical protein. | 0.999 |
OJG17921.1 | RsmB | RU95_GL002750 | RU95_GL002751 | Protein phosphatase 2C. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.996 |
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