Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG13852.1 | OJG16499.1 | RU95_GL004393 | RU95_GL003617 | Hypothetical protein. | Hypothetical protein. | 0.921 |
OJG13852.1 | OJG17292.1 | RU95_GL004393 | RU95_GL002937 | Hypothetical protein. | Triose-phosphate isomerase. | 0.921 |
OJG13852.1 | OJG17782.1 | RU95_GL004393 | RU95_GL002792 | Hypothetical protein. | Hypothetical protein. | 0.921 |
OJG13852.1 | rhaB | RU95_GL004393 | RU95_GL002711 | Hypothetical protein. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.514 |
OJG13852.1 | rhaD-3 | RU95_GL004393 | RU95_GL002789 | Hypothetical protein. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.906 |
OJG13852.1 | tpiA | RU95_GL004393 | RU95_GL002848 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.921 |
OJG14122.1 | OJG16499.1 | RU95_GL004206 | RU95_GL003617 | Class II aldolase and adducin protein. | Hypothetical protein. | 0.921 |
OJG14122.1 | OJG17292.1 | RU95_GL004206 | RU95_GL002937 | Class II aldolase and adducin protein. | Triose-phosphate isomerase. | 0.921 |
OJG14122.1 | OJG17782.1 | RU95_GL004206 | RU95_GL002792 | Class II aldolase and adducin protein. | Hypothetical protein. | 0.921 |
OJG14122.1 | rhaA | RU95_GL004206 | RU95_GL002712 | Class II aldolase and adducin protein. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.420 |
OJG14122.1 | rhaB | RU95_GL004206 | RU95_GL002711 | Class II aldolase and adducin protein. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.557 |
OJG14122.1 | rhaD-3 | RU95_GL004206 | RU95_GL002789 | Class II aldolase and adducin protein. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.919 |
OJG14122.1 | tpiA | RU95_GL004206 | RU95_GL002848 | Class II aldolase and adducin protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.921 |
OJG16499.1 | OJG13852.1 | RU95_GL003617 | RU95_GL004393 | Hypothetical protein. | Hypothetical protein. | 0.921 |
OJG16499.1 | OJG14122.1 | RU95_GL003617 | RU95_GL004206 | Hypothetical protein. | Class II aldolase and adducin protein. | 0.921 |
OJG16499.1 | OJG16517.1 | RU95_GL003617 | RU95_GL003577 | Hypothetical protein. | L-ribulose-5-phosphate 4-epimerase. | 0.921 |
OJG16499.1 | OJG17292.1 | RU95_GL003617 | RU95_GL002937 | Hypothetical protein. | Triose-phosphate isomerase. | 0.900 |
OJG16499.1 | OJG17782.1 | RU95_GL003617 | RU95_GL002792 | Hypothetical protein. | Hypothetical protein. | 0.903 |
OJG16499.1 | OJG20518.1 | RU95_GL003617 | RU95_GL002240 | Hypothetical protein. | L-ribulose-5-phosphate 4-epimerase. | 0.922 |
OJG16499.1 | rhaD-3 | RU95_GL003617 | RU95_GL002789 | Hypothetical protein. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.921 |
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