STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG23466.1Copper-translocating P-type ATPase. (644 aa)    
Predicted Functional Partners:
OJG23465.1
Hypothetical protein.
 
 
 0.957
OJG23464.1
Hypothetical protein.
 
  
 0.859
OJG23463.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
 
   
 0.841
OJG24400.1
Copper ion binding protein.
 
 
 0.767
OJG24114.1
ArsR family transcriptional regulator.
 
  
 0.616
OJG22173.1
Hypothetical protein.
 
  
 0.576
Arr
Hypothetical protein.
  
    0.547
OJG23467.1
Hypothetical protein.
       0.536
RibD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.504
OJG22433.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.476
Your Current Organism:
Enterococcus avium
NCBI taxonomy Id: 33945
Other names: ATCC 14025, CCUG 7983, CIP 103019, DSM 20679, E. avium, JCM 8722, LMG 10744, LMG:10744, NBRC 100477, NCDO 2369, NCIMB 702369, NCTC 9938, Streptococcus avium, strain Guthof E6844
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