Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG16193.1 | OJG16869.1 | RU95_GL003635 | RU95_GL003535 | Mur ligase middle protein. | UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase. | 0.549 |
OJG16193.1 | OJG17180.1 | RU95_GL003635 | RU95_GL003152 | Mur ligase middle protein. | Hypothetical protein. | 0.466 |
OJG16193.1 | rpoB | RU95_GL003635 | RU95_GL003150 | Mur ligase middle protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.460 |
OJG16869.1 | OJG16193.1 | RU95_GL003535 | RU95_GL003635 | UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase. | Mur ligase middle protein. | 0.549 |
OJG16869.1 | OJG17180.1 | RU95_GL003535 | RU95_GL003152 | UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase. | Hypothetical protein. | 0.455 |
OJG17180.1 | OJG16193.1 | RU95_GL003152 | RU95_GL003635 | Hypothetical protein. | Mur ligase middle protein. | 0.466 |
OJG17180.1 | OJG16869.1 | RU95_GL003152 | RU95_GL003535 | Hypothetical protein. | UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase. | 0.455 |
OJG17180.1 | OJG17181.1 | RU95_GL003152 | RU95_GL003153 | Hypothetical protein. | Hypothetical protein. | 0.586 |
OJG17180.1 | OJG21665.1 | RU95_GL003152 | RU95_GL001024 | Hypothetical protein. | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.574 |
OJG17180.1 | OJG22426.1 | RU95_GL003152 | RU95_GL000357 | Hypothetical protein. | Hypothetical protein. | 0.445 |
OJG17180.1 | msrA-2 | RU95_GL003152 | RU95_GL003154 | Hypothetical protein. | Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.590 |
OJG17180.1 | recF | RU95_GL003152 | RU95_GL003390 | Hypothetical protein. | DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.496 |
OJG17180.1 | rpoB | RU95_GL003152 | RU95_GL003150 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.582 |
OJG17180.1 | rpoC | RU95_GL003152 | RU95_GL003151 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.522 |
OJG17180.1 | sepF | RU95_GL003152 | RU95_GL001661 | Hypothetical protein. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.631 |
OJG17181.1 | OJG17180.1 | RU95_GL003153 | RU95_GL003152 | Hypothetical protein. | Hypothetical protein. | 0.586 |
OJG17181.1 | msrA-2 | RU95_GL003153 | RU95_GL003154 | Hypothetical protein. | Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.737 |
OJG21665.1 | OJG17180.1 | RU95_GL001024 | RU95_GL003152 | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Hypothetical protein. | 0.574 |
OJG22426.1 | OJG17180.1 | RU95_GL000357 | RU95_GL003152 | Hypothetical protein. | Hypothetical protein. | 0.445 |
msrA-2 | OJG17180.1 | RU95_GL003154 | RU95_GL003152 | Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Hypothetical protein. | 0.590 |
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