Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GlpO | NifJ | RU95_GL000674 | RU95_GL001027 | Alpha-glycerophosphate oxidase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.457 |
GlpO | OJG17031.1 | RU95_GL000674 | RU95_GL003295 | Alpha-glycerophosphate oxidase. | hydroxymethylglutaryl-CoA reductase, degradative. | 0.404 |
GlpO | OJG22433.1 | RU95_GL000674 | RU95_GL000364 | Alpha-glycerophosphate oxidase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.457 |
GlpO | OJG23213.1 | RU95_GL000674 | RU95_GL003429 | Alpha-glycerophosphate oxidase. | L-lactate oxidase. | 0.517 |
NifJ | GlpO | RU95_GL001027 | RU95_GL000674 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Alpha-glycerophosphate oxidase. | 0.457 |
NifJ | OJG17031.1 | RU95_GL001027 | RU95_GL003295 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | hydroxymethylglutaryl-CoA reductase, degradative. | 0.634 |
NifJ | OJG22433.1 | RU95_GL001027 | RU95_GL000364 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
NifJ | OJG23213.1 | RU95_GL001027 | RU95_GL003429 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | L-lactate oxidase. | 0.461 |
NifJ | OJG23498.1 | RU95_GL001027 | RU95_GL003106 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.647 |
NifJ | OJG23817.1 | RU95_GL001027 | RU95_GL001957 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.622 |
OJG10218.1 | OJG23213.1 | RU95_GL000696 | RU95_GL003429 | Hypothetical protein. | L-lactate oxidase. | 0.428 |
OJG17031.1 | GlpO | RU95_GL003295 | RU95_GL000674 | hydroxymethylglutaryl-CoA reductase, degradative. | Alpha-glycerophosphate oxidase. | 0.404 |
OJG17031.1 | NifJ | RU95_GL003295 | RU95_GL001027 | hydroxymethylglutaryl-CoA reductase, degradative. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.634 |
OJG17031.1 | OJG22433.1 | RU95_GL003295 | RU95_GL000364 | hydroxymethylglutaryl-CoA reductase, degradative. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.634 |
OJG17031.1 | OJG23213.1 | RU95_GL003295 | RU95_GL003429 | hydroxymethylglutaryl-CoA reductase, degradative. | L-lactate oxidase. | 0.505 |
OJG17031.1 | OJG23498.1 | RU95_GL003295 | RU95_GL003106 | hydroxymethylglutaryl-CoA reductase, degradative. | Hypothetical protein. | 0.570 |
OJG17031.1 | OJG23817.1 | RU95_GL003295 | RU95_GL001957 | hydroxymethylglutaryl-CoA reductase, degradative. | Hypothetical protein. | 0.511 |
OJG22352.1 | OJG23213.1 | RU95_GL000560 | RU95_GL003429 | Oxidoreductase, aldo/keto reductase. | L-lactate oxidase. | 0.428 |
OJG22358.1 | OJG23213.1 | RU95_GL000566 | RU95_GL003429 | Oxidoreductase, aldo/keto reductase. | L-lactate oxidase. | 0.428 |
OJG22433.1 | GlpO | RU95_GL000364 | RU95_GL000674 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Alpha-glycerophosphate oxidase. | 0.457 |
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