Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NifJ | NuoF | RU95_GL001027 | RU95_GL002668 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.999 |
NifJ | OJG17264.1 | RU95_GL001027 | RU95_GL002992 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.649 |
NifJ | OJG17265.1 | RU95_GL001027 | RU95_GL002993 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.649 |
NifJ | OJG21024.1 | RU95_GL001027 | RU95_GL001654 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.862 |
NifJ | OJG21300.1 | RU95_GL001027 | RU95_GL001474 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein; Belongs to the citrate synthase family. | 0.965 |
NifJ | OJG22431.1 | RU95_GL001027 | RU95_GL000362 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | ferredoxin-NADP(+) reductase subunit alpha. | 0.842 |
NifJ | OJG22433.1 | RU95_GL001027 | RU95_GL000364 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
NifJ | OJG23228.1 | RU95_GL001027 | RU95_GL003444 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.795 |
NifJ | pyrK | RU95_GL001027 | RU95_GL003700 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Dihydroorotate dehydrogenase, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.816 |
NuoF | NifJ | RU95_GL002668 | RU95_GL001027 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
NuoF | OJG17264.1 | RU95_GL002668 | RU95_GL002992 | Hypothetical protein. | Hypothetical protein. | 0.453 |
NuoF | OJG17265.1 | RU95_GL002668 | RU95_GL002993 | Hypothetical protein. | Hypothetical protein. | 0.453 |
NuoF | OJG21024.1 | RU95_GL002668 | RU95_GL001654 | Hypothetical protein. | Hypothetical protein. | 0.804 |
NuoF | OJG21300.1 | RU95_GL002668 | RU95_GL001474 | Hypothetical protein. | Hypothetical protein; Belongs to the citrate synthase family. | 0.761 |
NuoF | OJG22431.1 | RU95_GL002668 | RU95_GL000362 | Hypothetical protein. | ferredoxin-NADP(+) reductase subunit alpha. | 0.508 |
NuoF | OJG22433.1 | RU95_GL002668 | RU95_GL000364 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
NuoF | OJG23228.1 | RU95_GL002668 | RU95_GL003444 | Hypothetical protein. | Hypothetical protein. | 0.559 |
NuoF | pyrK | RU95_GL002668 | RU95_GL003700 | Hypothetical protein. | Dihydroorotate dehydrogenase, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.508 |
OJG17264.1 | NifJ | RU95_GL002992 | RU95_GL001027 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.649 |
OJG17264.1 | NuoF | RU95_GL002992 | RU95_GL002668 | Hypothetical protein. | Hypothetical protein. | 0.453 |
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