STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG15807.1Hypothetical protein. (571 aa)    
Predicted Functional Partners:
OJG15808.1
Hypothetical protein.
  
  
 0.778
OJG15806.1
Hypothetical protein.
  
  
 0.684
OJG15809.1
Hypothetical protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 0.653
TreB
PTS system, trehalose-specific IIBC component.
 
  
 0.593
OJG24171.1
Hypothetical protein.
 
  
0.587
OJG24465.1
Hypothetical protein.
  
 0.543
OJG21960.1
Amino acid permease.
  
 0.543
OJG21571.1
Hypothetical protein.
  
 0.543
YjeM
Hypothetical protein.
  
 0.543
OJG21492.1
Glutamate:gamma-aminobutyrate antiporter.
  
 0.543
Your Current Organism:
Enterococcus avium
NCBI taxonomy Id: 33945
Other names: ATCC 14025, CCUG 7983, CIP 103019, DSM 20679, E. avium, JCM 8722, LMG 10744, LMG:10744, NBRC 100477, NCDO 2369, NCIMB 702369, NCTC 9938, Streptococcus avium, strain Guthof E6844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.