Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG13693.1 | OJG23045.1 | RU95_GL000305 | RU95_GL003793 | Hypothetical protein. | Hypothetical protein. | 0.630 |
OJG13693.1 | recA | RU95_GL000305 | RU95_GL003018 | Hypothetical protein. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.704 |
OJG20343.1 | OJG23045.1 | RU95_GL002358 | RU95_GL003793 | Hypothetical protein; Belongs to the DNA polymerase type-Y family. | Hypothetical protein. | 0.694 |
OJG20343.1 | recA | RU95_GL002358 | RU95_GL003018 | Hypothetical protein; Belongs to the DNA polymerase type-Y family. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.704 |
OJG23040.1 | OJG23041.1 | RU95_GL003788 | RU95_GL003789 | Hypothetical protein. | Hypothetical protein. | 0.686 |
OJG23040.1 | OJG23042.1 | RU95_GL003788 | RU95_GL003790 | Hypothetical protein. | Hypothetical protein; Belongs to the 'phage' integrase family. | 0.714 |
OJG23040.1 | OJG23043.1 | RU95_GL003788 | RU95_GL003791 | Hypothetical protein. | Hypothetical protein. | 0.594 |
OJG23040.1 | OJG23044.1 | RU95_GL003788 | RU95_GL003792 | Hypothetical protein. | Hypothetical protein. | 0.594 |
OJG23040.1 | OJG23045.1 | RU95_GL003788 | RU95_GL003793 | Hypothetical protein. | Hypothetical protein. | 0.633 |
OJG23040.1 | OJG23046.1 | RU95_GL003788 | RU95_GL003794 | Hypothetical protein. | Hypothetical protein. | 0.539 |
OJG23041.1 | OJG23040.1 | RU95_GL003789 | RU95_GL003788 | Hypothetical protein. | Hypothetical protein. | 0.686 |
OJG23041.1 | OJG23042.1 | RU95_GL003789 | RU95_GL003790 | Hypothetical protein. | Hypothetical protein; Belongs to the 'phage' integrase family. | 0.741 |
OJG23041.1 | OJG23043.1 | RU95_GL003789 | RU95_GL003791 | Hypothetical protein. | Hypothetical protein. | 0.689 |
OJG23041.1 | OJG23044.1 | RU95_GL003789 | RU95_GL003792 | Hypothetical protein. | Hypothetical protein. | 0.689 |
OJG23041.1 | OJG23045.1 | RU95_GL003789 | RU95_GL003793 | Hypothetical protein. | Hypothetical protein. | 0.680 |
OJG23041.1 | OJG23046.1 | RU95_GL003789 | RU95_GL003794 | Hypothetical protein. | Hypothetical protein. | 0.610 |
OJG23042.1 | OJG23040.1 | RU95_GL003790 | RU95_GL003788 | Hypothetical protein; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.714 |
OJG23042.1 | OJG23041.1 | RU95_GL003790 | RU95_GL003789 | Hypothetical protein; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.741 |
OJG23042.1 | OJG23043.1 | RU95_GL003790 | RU95_GL003791 | Hypothetical protein; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.758 |
OJG23042.1 | OJG23044.1 | RU95_GL003790 | RU95_GL003792 | Hypothetical protein; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.738 |
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