Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GlgB | OJG13994.1 | RU95_GL003841 | RU95_GL004350 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Hypothetical protein. | 0.665 |
GlgB | OJG17315.1 | RU95_GL003841 | RU95_GL002960 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Accessory Sec system protein Asp1. | 0.665 |
GlgB | OJG17318.1 | RU95_GL003841 | RU95_GL002963 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Accessory Sec system glycosylation protein GtfA. | 0.665 |
OJG13959.1 | OJG13994.1 | RU95_GL004363 | RU95_GL004350 | Hypothetical protein. | Hypothetical protein. | 0.722 |
OJG13959.1 | OJG17315.1 | RU95_GL004363 | RU95_GL002960 | Hypothetical protein. | Accessory Sec system protein Asp1. | 0.550 |
OJG13959.1 | OJG17318.1 | RU95_GL004363 | RU95_GL002963 | Hypothetical protein. | Accessory Sec system glycosylation protein GtfA. | 0.552 |
OJG13959.1 | OJG17429.1 | RU95_GL004363 | RU95_GL002875 | Hypothetical protein. | UDP-galactopyranose mutase. | 0.826 |
OJG13993.1 | OJG13994.1 | RU95_GL004349 | RU95_GL004350 | Hypothetical protein. | Hypothetical protein. | 0.636 |
OJG13994.1 | GlgB | RU95_GL004350 | RU95_GL003841 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.665 |
OJG13994.1 | OJG13959.1 | RU95_GL004350 | RU95_GL004363 | Hypothetical protein. | Hypothetical protein. | 0.722 |
OJG13994.1 | OJG13993.1 | RU95_GL004350 | RU95_GL004349 | Hypothetical protein. | Hypothetical protein. | 0.636 |
OJG13994.1 | OJG17315.1 | RU95_GL004350 | RU95_GL002960 | Hypothetical protein. | Accessory Sec system protein Asp1. | 0.681 |
OJG13994.1 | OJG17316.1 | RU95_GL004350 | RU95_GL002961 | Hypothetical protein. | Accessory Sec system protein Asp2. | 0.859 |
OJG13994.1 | OJG17317.1 | RU95_GL004350 | RU95_GL002962 | Hypothetical protein. | Accessory Sec system protein Asp3. | 0.851 |
OJG13994.1 | OJG17318.1 | RU95_GL004350 | RU95_GL002963 | Hypothetical protein. | Accessory Sec system glycosylation protein GtfA. | 0.571 |
OJG13994.1 | OJG17429.1 | RU95_GL004350 | RU95_GL002875 | Hypothetical protein. | UDP-galactopyranose mutase. | 0.743 |
OJG13994.1 | OJG21022.1 | RU95_GL004350 | RU95_GL001652 | Hypothetical protein. | Hypothetical protein. | 0.618 |
OJG13994.1 | dltC | RU95_GL004350 | RU95_GL000073 | Hypothetical protein. | D-alanine-poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.617 |
OJG17315.1 | GlgB | RU95_GL002960 | RU95_GL003841 | Accessory Sec system protein Asp1. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.665 |
OJG17315.1 | OJG13959.1 | RU95_GL002960 | RU95_GL004363 | Accessory Sec system protein Asp1. | Hypothetical protein. | 0.550 |
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