STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG25489.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
AOG25488.1
DNA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
AOG25487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.670
AOG25486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.665
AOG27101.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
AOG25485.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
AOG27102.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.439
AOG25490.1
Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.439
Your Current Organism:
Lactobacillus johnsonii
NCBI taxonomy Id: 33959
Other names: ATCC 33200, CCUG 30725, CIP 103620, DSM 10533, JCM 2012, L. johnsonii, VPI 7960
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.