Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOG25465.1 | AOG26012.1 | BBP16_00380 | BBP16_03510 | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
| AOG26012.1 | AOG25465.1 | BBP16_03510 | BBP16_00380 | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
| AOG26012.1 | AOG26013.1 | BBP16_03510 | BBP16_03515 | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
| AOG26012.1 | guaA | BBP16_03510 | BBP16_07445 | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.507 |
| AOG26012.1 | prfC | BBP16_03510 | BBP16_03505 | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.834 |
| AOG26013.1 | AOG26012.1 | BBP16_03515 | BBP16_03510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
| AOG26013.1 | prfC | BBP16_03515 | BBP16_03505 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.591 |
| guaA | AOG26012.1 | BBP16_07445 | BBP16_03510 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| guaA | prfC | BBP16_07445 | BBP16_03505 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.645 |
| prfC | AOG26012.1 | BBP16_03505 | BBP16_03510 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |
| prfC | AOG26013.1 | BBP16_03505 | BBP16_03515 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.591 |
| prfC | guaA | BBP16_03505 | BBP16_07445 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.645 |