STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG26626.1Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
AOG26625.1
Maltose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ugpC
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
    
 0.793
AOG26624.1
Alpha-glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.765
AOG25732.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.750
cycB
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.597
malG
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.547
AOG26623.1
Glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.526
AOG25710.1
Divalent metal cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.507
iphP_4
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.502
AOG26538.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.502
Your Current Organism:
Lactobacillus johnsonii
NCBI taxonomy Id: 33959
Other names: ATCC 33200, CCUG 30725, CIP 103620, DSM 10533, JCM 2012, L. johnsonii, VPI 7960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.