Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZL43043.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
KZL43044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.967
KZL43042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
KZL42537.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
KZL41302.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.697
KZL41086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.671
KZL43238.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.658
KZL42547.1
Hypothetical protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
 
  
 0.594
KZL38932.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
KZL39423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
KZL41089.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.499
Your Current Organism:
Lactobacillus collinoides
NCBI taxonomy Id: 33960
Other names: ATCC 27612, CCUG 32259, CIP 103008, DSM 20515, L. collinoides, LMG 9194, LMG:9194
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