Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZL41815.1Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)    
Predicted Functional Partners:
KZL40498.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.720
KZL38892.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.720
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.677
KZL42992.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.645
KZL42739.1
Amino acid APC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.645
groEL
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
      
 0.637
arcA
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.618
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.601
KZL35689.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
 
  0.541
KZL42871.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.465
Your Current Organism:
Lactobacillus collinoides
NCBI taxonomy Id: 33960
Other names: ATCC 27612, CCUG 32259, CIP 103008, DSM 20515, L. collinoides, LMG 9194, LMG:9194
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