Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZL41615.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa)    
Predicted Functional Partners:
KZL39337.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.614
KZL35967.1
Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.605
pepX
X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
     
 0.592
KZL41614.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
KZL40487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
     
 0.578
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
      
 0.547
KZL39047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.512
KZL41493.1
Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.502
KZL42780.1
Oligopeptidase PepB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.458
KZL40138.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
     
 0.444
Your Current Organism:
Lactobacillus collinoides
NCBI taxonomy Id: 33960
Other names: ATCC 27612, CCUG 32259, CIP 103008, DSM 20515, L. collinoides, LMG 9194, LMG:9194
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