| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KZL37739.1 | KZL40477.1 | TY91_12435 | TY91_08190 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | 0.704 |
| KZL37739.1 | lexA | TY91_12435 | TY91_03910 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.582 |
| KZL37739.1 | recA | TY91_12435 | TY91_08510 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.593 |
| KZL37739.1 | recR | TY91_12435 | TY91_06105 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.696 |
| KZL37739.1 | recX | TY91_12435 | TY91_06795 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Modulates RecA activity; Belongs to the RecX family. | 0.684 |
| KZL37739.1 | ruvB | TY91_12435 | TY91_06900 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.782 |
| KZL37739.1 | topA | TY91_12435 | TY91_07320 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.659 |
| KZL37739.1 | xseA | TY91_12435 | TY91_08215 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.802 |
| KZL37739.1 | xseB | TY91_12435 | TY91_08210 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.735 |
| KZL40477.1 | KZL37739.1 | TY91_08190 | TY91_12435 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| KZL40477.1 | argR-3 | TY91_08190 | TY91_08195 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | ArgR family transcriptional regulator; Regulates arginine biosynthesis genes. | 0.754 |
| KZL40477.1 | lexA | TY91_08190 | TY91_03910 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.730 |
| KZL40477.1 | recA | TY91_08190 | TY91_08510 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.792 |
| KZL40477.1 | recR | TY91_08190 | TY91_06105 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Recombinase; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.706 |
| KZL40477.1 | recX | TY91_08190 | TY91_06795 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical protein; Modulates RecA activity; Belongs to the RecX family. | 0.738 |
| KZL40477.1 | ruvB | TY91_08190 | TY91_06900 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.717 |
| KZL40477.1 | topA | TY91_08190 | TY91_07320 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.697 |
| KZL40477.1 | xseA | TY91_08190 | TY91_08215 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.912 |
| KZL40477.1 | xseB | TY91_08190 | TY91_08210 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.751 |
| argR-3 | KZL40477.1 | TY91_08195 | TY91_08190 | ArgR family transcriptional regulator; Regulates arginine biosynthesis genes. | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | 0.754 |
