Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZL36469.1GAF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)    
Predicted Functional Partners:
KZL36467.1
Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
metN-2
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.776
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
  0.747
KZL35877.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.747
KZL35533.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.714
KZL42921.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.712
KZL35572.1
Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.712
KZL43300.1
O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.708
KZL42850.1
O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.708
KZL40177.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.708
Your Current Organism:
Lactobacillus collinoides
NCBI taxonomy Id: 33960
Other names: ATCC 27612, CCUG 32259, CIP 103008, DSM 20515, L. collinoides, LMG 9194, LMG:9194
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