STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0141TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; KEGG: hdu:HD0564 aspartate ammonia-lyase. (475 aa)    
Predicted Functional Partners:
Asuc_0140
TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: hin:HI0745 L-asparaginase II; Belongs to the asparaginase 1 family.
 
 
 0.994
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (By similarity); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
   
 
  0.911
Asuc_0027
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain protein; KEGG: msu:MS0297 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.906
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: msu:MS0237 argininosuccinate lyase.
     
0.905
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.903
asnA
PFAM: aspartate--ammonia ligase; KEGG: msu:MS0036 asparagine synthetase A.
     
  0.900
Asuc_1574
Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: hit:NTHI1423 aspartate aminotransferase.
     
  0.900
Asuc_0801
TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: msu:MS1703 aspartokinases; In the C-terminal section; belongs to the homoserine dehydrogenase family.
    
 0.836
argG
PFAM: argininosuccinate synthase; KEGG: msu:MS1479 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
     
 0.817
Asuc_1567
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region; KEGG: msu:MS1355 pyruvate and 2-oxoglutarate dehydrogenases, E1 component.
     
 0.806
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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