STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (394 aa)    
Predicted Functional Partners:
Asuc_0371
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: tte:TTE1940 mannitol-1-phosphate/altronate dehydrogenase.
 
 
 0.956
uxaC
PFAM: Glucuronate isomerase; KEGG: msu:MS0544 glucuronate isomerase.
 
  
 0.939
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
  
 
0.911
Asuc_1474
TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msu:MS0563 dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.910
Asuc_0154
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: msu:MS0530 altronate dehydratase.
  
 
 0.908
Asuc_1580
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: pmu:PM1645 ribose-5-phosphate isomerase.
   
 
  0.810
Asuc_1597
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: msu:MS0383 ribose 5-phosphate isomerase RpiB.
   
 
  0.810
Asuc_0153
PFAM: PfkB domain protein; KEGG: msu:MS0545 sugar kinases, ribokinase family.
    
 0.809
Asuc_0373
PFAM: PfkB domain protein; KEGG: msu:MS0545 sugar kinases, ribokinase family.
    
 0.809
Asuc_1472
PFAM: PfkB domain protein; KEGG: msu:MS0565 sugar kinases, ribokinase family.
    
 0.809
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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