STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0156TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0528 hypothetical protein. (430 aa)    
Predicted Functional Partners:
Asuc_0157
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0527 hypothetical protein.
 
   0.921
Asuc_0158
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0526 DctP protein.
 
    0.913
Asuc_1163
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: oih:OB2702 C4-dicarboxylate transport system C4-dicarboxylate-binding protein.
  
  
 0.827
Asuc_0272
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0050 DctP protein.
 
    0.789
Asuc_0366
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein).
  
    0.785
Asuc_1579
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pmu:PM1644 hypothetical HI1028.
 
    0.785
Asuc_0273
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0049 DctP protein.
 
    0.784
Asuc_1923
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0698 DctP protein.
  
    0.783
Asuc_0146
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0542 DctP protein.
  
    0.781
Asuc_0147
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0541 hypothetical protein.
  
 
 0.759
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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