STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0196Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: pmu:PM0154 ribose transport system permease protein. (322 aa)    
Predicted Functional Partners:
Asuc_0197
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hit:NTHI0632 ribose-binding periplasmic protein.
 0.996
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.993
Asuc_0081
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS1612 periplasmic sugar-binding proteins.
 0.973
Asuc_0082
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS1611 ABC-type sugar (aldose) transport system, ATPase component.
 0.971
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.959
Asuc_0083
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: msu:MS1610 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
  
 
0.910
araG
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.850
Asuc_0175
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB0812 ABC transporter, periplasmic sugar binding protein.
 
 0.829
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.815
Asuc_1897
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0642 ABC-type sugar (aldose) transport system, ATPase component.
 
 0.810
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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