STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0213PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rsp:RSP_3384 mandelate racemase/muconate lactonizing enzyme family protein. (402 aa)    
Predicted Functional Partners:
Asuc_0214
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: stm:STM0764 transcriptional regulator.
 
     0.623
Asuc_1854
PFAM: Arylesterase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: msu:MS0684 gluconolactonase.
 
   
 0.546
Asuc_1583
PFAM: amidohydrolase 2; KEGG: pau:PA14_36110 putative hydrolase.
 
   
 0.489
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.