STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0235TIGRFAM: putative hexulose-6-phosphate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: msu:MS0047 SgaU protein. (286 aa)    
Predicted Functional Partners:
Asuc_0234
TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: msu:MS0046 ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
 0.996
Asuc_0240
PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: msu:MS0020 3-hexulose-6-phosphate synthase and related proteins.
 
 
 0.987
Asuc_0084
PFAM: carbohydrate kinase FGGY; KEGG: msu:MS1609 XylB protein; Belongs to the FGGY kinase family.
 
  
  0.931
Asuc_0274
PFAM: carbohydrate kinase FGGY; KEGG: msu:MS0048 sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
 
  
  0.931
Asuc_0238
Putative sugar-specific permease SgaT/UlaA; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; putative sugar-specific permease SgaT/UlaA; KEGG: msu:MS0022 uncharacterized BCR.
 
  
 0.903
Asuc_0237
KEGG: msu:MS0023 predicted Zn-dependent hydrolases of the beta-lactamase fold.
 
   
 0.881
Asuc_0239
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: hdu:HD1859 PTS system Enzyme II-A permease component.
 
  
 0.777
Asuc_0236
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: pmu:PM0762 transcription regulator, putative.
 
   
 0.716
Asuc_0508
PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: msu:MS0151 uncharacterized BCR.
 
   
 0.614
Asuc_0509
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: msu:MS0150 phosphotransferase system component IIB of unknown specificity.
 
  
 0.460
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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