STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0268PFAM: Malate/L-lactate dehydrogenase; KEGG: msu:MS0054 malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. (332 aa)    
Predicted Functional Partners:
Asuc_0274
PFAM: carbohydrate kinase FGGY; KEGG: msu:MS0048 sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
 
  
  0.937
Asuc_0084
PFAM: carbohydrate kinase FGGY; KEGG: msu:MS1609 XylB protein; Belongs to the FGGY kinase family.
 
  
  0.918
Asuc_0269
PFAM: conserved hypothetical protein 22; KEGG: msu:MS0053 EbgC protein.
 
    0.612
Asuc_0270
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0052 hypothetical protein.
 
     0.612
Asuc_0271
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0051 hypothetical protein.
       0.532
Asuc_0267
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: msu:MS0055 IclR protein.
       0.525
Asuc_0669
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: msu:MS0390 malic enzyme.
     
 0.410
Asuc_0272
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0050 DctP protein.
       0.408
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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