STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0317PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS2069 ABC-type sugar transport systems, permease components. (511 aa)    
Predicted Functional Partners:
Asuc_0316
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS2070 sugar permeases.
 0.999
Asuc_0318
Extracellular solute-binding protein family 1; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 0.997
Asuc_0319
Extracellular solute-binding protein family 1; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 0.997
malK
ABC transporter related; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.
 
 0.996
Asuc_1717
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pmu:PM1456 ATP-binding transport protein, putative; Belongs to the ABC transporter superfamily.
 
 0.943
Asuc_0315
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: msu:MS2071 glycosidases.
 
  
 0.906
Asuc_0323
PFAM: Maltose operon periplasmic; KEGG: msu:MS2065 maltose operon periplasmic protein.
 
  
 0.880
lamB
Porin LamB type; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.
 
  
 0.866
malT
Regulatory protein LuxR; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box.
  
    0.662
Asuc_0975
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: bld:BLi04200 close homolog to BglP PTS enzyme IIBCA component; RBL02058.
   
 
 0.616
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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