STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0366TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein). (335 aa)    
Predicted Functional Partners:
Asuc_0368
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gka:GK1972 transporter.
 
    0.931
Asuc_0367
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: gka:GK1973 transporter.
 
    0.899
Asuc_0369
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bsu:BG13207 similar to alcohol dehydrogenase.
     
 0.869
Asuc_0156
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0528 hypothetical protein.
 
    0.787
Asuc_0271
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0051 hypothetical protein.
 
    0.787
Asuc_1165
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: oih:OB2700 C4-dicarboxylate transport system permease large protein.
 
    0.787
Asuc_1577
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pmu:PM1642 hypothetical E.coli.
 
    0.787
Asuc_1921
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0696 hypothetical protein.
 
    0.787
Asuc_0148
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0540 hypothetical protein.
 
    0.786
Asuc_0270
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0052 hypothetical protein.
 
    0.771
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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