Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Asuc_0367PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: gka:GK1973 transporter. (169 aa)    
Predicted Functional Partners:
Asuc_0157
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0527 hypothetical protein.
  
  
  0.964
Asuc_0147
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0541 hypothetical protein.
  
  
  0.951
Asuc_0368
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gka:GK1972 transporter.
 
   0.943
Asuc_1922
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0697 hypothetical protein.
  
  
  0.939
Asuc_1164
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: oih:OB2701 hypothetical protein.
  
  
  0.932
Asuc_0270
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: msu:MS0052 hypothetical protein.
  
  
 
0.923
Asuc_1578
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pmu:PM1643 unknown.
     
  0.900
Asuc_0366
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein).
 
    0.899
Asuc_0271
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0051 hypothetical protein.
 
   0.770
Asuc_0272
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msu:MS0050 DctP protein.
 
    0.759
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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