STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0371PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: tte:TTE1940 mannitol-1-phosphate/altronate dehydrogenase. (533 aa)    
Predicted Functional Partners:
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.995
uxaC
PFAM: Glucuronate isomerase; KEGG: msu:MS0544 glucuronate isomerase.
 
 
 0.971
Asuc_0369
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bsu:BG13207 similar to alcohol dehydrogenase.
    
 0.966
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.956
Asuc_0455
TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: msu:MS0411 phosphotransferase system, mannitol-specific IIBC component.
  
  
 0.950
Asuc_0372
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bha:BH1062 transcriptional regulator (GntR family).
   
 0.928
Asuc_0583
Transcriptional antiterminator, BglG; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRD domain protein; Helix-turn-helix type 11 domain protein; KEGG: sak:SAK_1762 PRD domain/PTS system IIA domain protein.
  
  
 0.785
Asuc_0373
PFAM: PfkB domain protein; KEGG: msu:MS0545 sugar kinases, ribokinase family.
     
 0.768
Asuc_0374
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: msu:MS0546 2-keto-3-deoxy-6-phosphogluconate aldolase.
  
  
 0.681
Asuc_0368
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gka:GK1972 transporter.
       0.655
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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