Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Asuc_0397PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_1969 hypothetical protein. (528 aa)    
Predicted Functional Partners:
Asuc_1100
PFAM: cell divisionFtsK/SpoIIIE; KEGG: msu:MS1454 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.833
Asuc_0396
PFAM: Sel1 domain protein repeat-containing protein; KEGG: zmo:ZMO0068 hypothetical protein.
  
  
 0.786
Asuc_0395
PFAM: pentapeptide repeat protein; KEGG: cte:CT2067 pentapeptide repeat family protein.
     
 0.754
Asuc_1254
PFAM: Fibronectin type III domain protein; Protein of unknown function DUF1983; KEGG: nmc:NMC0870 Neisseria meningitidis phage 2120; ORF 4.
   
 
 0.687
Asuc_0860
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases.
   
 
 0.633
Asuc_1401
PFAM: protein of unknown function DUF1508; KEGG: msu:MS1092 hypothetical protein.
    
 
 0.627
Asuc_1084
TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: msu:MS0821 periplasmic protease; Belongs to the peptidase S41A family.
  
 
 0.619
Asuc_0398
Hypothetical protein.
       0.594
Asuc_0139
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pmu:PM1569 tyrosine phosphatase, putative.
  
 
 
 0.551
Asuc_0824
PFAM: acyltransferase 3; KEGG: bte:BTH_II0715 hypothetical protein.
  
 
 0.480
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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