STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0755PFAM: DsrE family protein; KEGG: hit:NTHI0709 hypothetical protein. (126 aa)    
Predicted Functional Partners:
Asuc_0756
PFAM: DsrE family protein; KEGG: msu:MS0160 uncharacterized protein involved in the oxidation of intracellular sulfur; Belongs to the DsrF/TusC family.
 
 0.999
Asuc_0757
KEGG: hit:NTHI0711 uncharacterized conserved protein involved in oxidation of intracellular sulfur.
  
 0.998
Asuc_1004
DsrC family protein; Part of a sulfur-relay system.
 
 
 0.983
tusA
SirA family protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
 
 0.969
Asuc_1053
PFAM: SirA family protein; KEGG: msu:MS1561 SirA protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.948
Asuc_0754
PFAM: YheO domain protein; KEGG: hso:HS_1636 hypothetical protein.
  
    0.804
Asuc_2006
PFAM: protein of unknown function DUF177; KEGG: msu:MS1868 predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.539
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]
       0.526
hflD
PFAM: protein of unknown function DUF489; KEGG: pmu:PM1850 hypothetical HI0638.
 
     0.493
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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