STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0776KEGG: msu:MS1908 hypothetical protein. (329 aa)    
Predicted Functional Partners:
Asuc_1189
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pmu:PM0564 cytosine permease/transport.
 
  
 0.776
Asuc_0777
PFAM: sulfatase; KEGG: msu:MS1909 predicted hydrolase of alkaline phosphatase superfamily.
       0.444
Asuc_0778
PFAM: protein of unknown function DUF1414; KEGG: pmu:PM1884 hypothetical HI0840; Belongs to the UPF0352 family.
       0.415
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.