Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Asuc_0797KEGG: hit:NTHI1418 putative ABC-type Co2+ transport system, periplasmic component. (234 aa)    
Predicted Functional Partners:
Asuc_0794
PFAM: cobalt transport protein; KEGG: hit:NTHI1421 predicted cobalt transport protein.
 
  
 0.979
Asuc_0795
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: hin:HI1621 cobalamin biosynthesis protein.
 
  
 0.971
Asuc_0793
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hit:NTHI1422 predicted ABC-type cobalt transport system, ATPase component.
 
  
 0.969
Asuc_0796
KEGG: hit:NTHI1419 hypothetical protein.
 
     0.910
Asuc_0116
Kmt1; KEGG: pmu:PM1361 kmt1.
  
     0.761
Asuc_1525
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS0580 PotD protein.
  
     0.759
Asuc_0855
KEGG: msu:MS1114 hypothetical protein.
  
     0.758
Asuc_1333
PFAM: glycosyl transferase family 25; KEGG: msu:MS0905 glycosyltransferase involved in LPS biosynthesis.
  
     0.750
Asuc_1788
Conserved hypothetical protein; KEGG: pmu:PM0964 hypothetical HI0939.
  
     0.742
Asuc_1221
PFAM: DNA N-6-adenine-methyltransferase; KEGG: sgl:SG0744 phage DNA methyltransferase.
  
     0.715
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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