STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_0815PFAM: polysaccharide biosynthesis protein; KEGG: msu:MS0657 membrane protein involved in the export of O-antigen and teichoic acid. (418 aa)    
Predicted Functional Partners:
Asuc_0822
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: msu:MS0662 WcaJ protein.
 
  
 0.865
Asuc_0814
KEGG: msu:MS0656 hypothetical protein.
 
  
 0.863
Asuc_0813
PFAM: lipopolysaccharide biosynthesis protein; KEGG: msu:MS0655 hypothetical protein.
  
  
 0.833
Asuc_0832
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.826
Asuc_0821
PFAM: UDP-galactopyranose mutase; KEGG: msu:MS0661 UDP-galactopyranose mutase.
 
  
 0.787
Asuc_0817
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: msu:MS0659 TagB protein.
  
  
 0.786
Asuc_0816
TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; KEGG: msu:MS0658 cytidylyltransferase.
       0.780
Asuc_0818
KEGG: msu:MS0660 hypothetical protein.
       0.773
Asuc_0055
PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: neu:NE1343 UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.687
Asuc_0826
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: vfi:VF0166 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.687
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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