STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1065PFAM: aldehyde dehydrogenase; KEGG: msu:MS1551 PutA protein; Belongs to the aldehyde dehydrogenase family. (494 aa)    
Predicted Functional Partners:
Asuc_0403
PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS1802 alcohol dehydrogenase IV.
 
 0.943
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.928
Asuc_0591
PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS2190 alcohol dehydrogenase IV; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.922
Asuc_2099
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rfr:Rfer_2439 alcohol dehydrogenase, zinc-binding.
  
 
 0.921
Asuc_0067
TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: smu:SMU.119 putative alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
 0.916
Asuc_0552
2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: nmc:NMC1504 hypothetical protein.
  
 
 0.911
acyP
PFAM: acylphosphatase; KEGG: pmu:PM0396 acylphosphatase, putative.
    
 0.906
Asuc_1847
Glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: msu:MS0689 O-succinylbenzoate synthase and related enzymes.
     
 0.903
Asuc_1857
PFAM: glycerate kinase; KEGG: msu:MS0693 glycerate kinase; Belongs to the glycerate kinase type-1 family.
   
 
 0.902
Asuc_1662
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.876
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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