STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1084TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: msu:MS0821 periplasmic protease; Belongs to the peptidase S41A family. (691 aa)    
Predicted Functional Partners:
Asuc_2060
Tetratricopeptide TPR_2 repeat protein; May be involved in cell division.
  
 
 
 0.725
proQ
ProQ activator of osmoprotectant transporter ProP; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
 
  
 0.681
Asuc_1085
KEGG: msu:MS0822 hypothetical protein.
 
     0.657
Asuc_0397
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_1969 hypothetical protein.
  
   0.633
Asuc_1965
TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: msu:MS1925 predicted membrane-associated Zn-dependent proteases 1.
 
  
 0.562
Asuc_0860
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases.
 
  
 0.525
Asuc_0990
N-acetylmuramoyl-L-alanine amidase; PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: msu:MS1515 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.480
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: msu:MS1090 phenylalanyl-tRNA synthetase beta subunit.
   
 
 0.474
Asuc_0302
TIGRFAM: oxaloacetate decarboxylase alpha subunit; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: msu:MS0039 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, alpha subunit.
  
    0.466
Asuc_0571
PFAM: peptidase M23B; KEGG: msu:MS2320 NlpD protein.
  
  
 0.462
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.