STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1130TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS1525 ABC-type thiamine transport system, permease components. (539 aa)    
Predicted Functional Partners:
Asuc_1129
TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein; KEGG: msu:MS1526 ABC-type iron/thiamine transport systems, periplasmic component.
 
 
 0.993
thiQ
ABC transporter, ATPase subunit, ThiQ subfamily; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
 
 
 0.982
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.801
Asuc_1681
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS1583 ABC-type iron/thiamine transport systems, periplasmic component.
 
  
 0.587
Asuc_1682
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS1585 ABC-type iron/thiamine transport systems, periplasmic component.
 
  
 0.579
Asuc_1267
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS1370 TbpA protein.
 
  
 0.561
Asuc_1133
PFAM: protein of unknown function DUF488; KEGG: msu:MS1522 hypothetical protein.
       0.547
Asuc_1718
PFAM: extracellular solute-binding protein family 1; KEGG: pmu:PM1457 periplasmic iron-binding protein, putative.
 
  
 0.526
Asuc_1719
KEGG: pmu:PM1458 phosphoglycerate transport regulatory protein.
 
  
 0.479
Asuc_0125
TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: msu:MS0064 5'-nucleotidase/2', 3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
  
     0.421
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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