STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1139Putative plasmid maintenance system antidote protein, XRE family; TIGRFAM: addiction module antidote protein, HigA family; KEGG: neu:NE1304 bacterial regulatory protein, LacI family:helix-turn-helix motif. (99 aa)    
Predicted Functional Partners:
Asuc_1214
KEGG: sfu:Sfum_1442 killer suppression protein HigA, putative.
   
 
 0.726
Asuc_1211
TIGRFAM: Addiction module killer protein HI1419; PFAM: protein of unknown function DUF891; KEGG: dvl:Dvul_1444 protein of unknown function DUF891.
 
     0.686
Asuc_1212
Putative transcriptional regulator; TIGRFAM: Addiction module antidote protein HI1420; KEGG: ppu:PP_0829 hypothetical protein.
 
     0.628
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.