STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1155PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msu:MS0956 threonine dehydrogenase and related Zn-dependent dehydrogenases. (347 aa)    
Predicted Functional Partners:
Asuc_1156
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msu:MS0955 dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.922
Asuc_1157
TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: hso:HS_0378 gluconate permease.
       0.683
Asuc_1154
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: msu:MS0957 gluconate kinase.
  
  
 0.510
Asuc_0591
PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS2190 alcohol dehydrogenase IV; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.461
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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